Click here to download the list of posters.
Postersessions
Depending on their poster number, authors need to be present at their posters on:
- Wednesday, October 5, 2016, 16:50-18:30: odd poster numbers
- Thursday, October 6, 2016, 14:30-16:20: even poster numbers
Session 1 – Infection modelling
| P1 | Modeling the host-pathogen interactions of macrophages and Candida albicans using game theory and dynamic optimization. Sybille Dühring (Jena/Germany) |
| P2 | Dimensionality of motion but not receptor morphology governs affinity of receptor-ligand binding as revealed by molecular agent-based models. Teresa Lehnert (Jena/Germany) |
| P3 | Iron redistribution after Candida albicans infection in the murine kidney. Theresia Conrad (Jena/Germany) |
| P4 | Investigating Candida albicans resistance in whole-blood assays by virtual infection models using parallelized parameter estimation. Maria Prauße (Jena/Germany) |
| P5 | Simulation of the dynamics of primary immunodeficiencies in CD4+ T-cells. Gabriel Teku (Lund/Sweden) |
| P6 | Regulatory networks in the reponse of human monocytes to fungal and bacterial pathogens. Michael Weber (Jena/Germany) |
| P7 | Mathematical Modeling of Plus-Strand RNA Virus Genome Replication to Identify Potential Drug Targets. Carolin Zitzmann (Greifswald/Germany) |
| P8 | Influence of Vitamins A and D on long non-coding RNAs of human monocytes during infection with fungi A. fumigatus, C. albicans and bacteria E. coli Konstantin Riege (Jena/Germany) |
| P9 | Comparison of differentially expressed genes in two human cell lines infected with Zaire and Reston Ebolaviruses. Nelly F. Mostajo Berrospi (Jena/Germany) |
Session 2 – Regulatory interactions and signalling
| P11 | Large Scale Heterogeneities Create Massiv Metabolic and Transcriptional Responses in E. coli – Elucidating Regulatory Kinetics and ATP Demands. Ralf Takors (Stuttgart/Germany) |
| P12 | Dopamine, Norepinephrine, and Serotonin produce no significant effect on the growth of Lactobacillus acidophilus (helveticus) NK-1. Alexander Oleskin (Moscow/Russian Federation) |
| P13 | Genome-wide gene regulatory network in the opportunistic human pathogenic fungi Aspergillus fumigatus. Silvia Gerber (Jena/Germany) |
| P14 | Post-translational regulation of enzyme activity investigated by protein-protein docking: Sexual and parasitic communication of the fungal fusion parasite Parasitella parasitica. Sabrina Ellenberger (Jena/Germany) |
| P15 | Polynomial parametric modeling of synthetic transcriptional circuits in S. cerevisiae. Zhang Wei (Hangzhou/China) |
| P16 | Emergent Network Properties and Entrainment in the Mammalian Circadian Clock. Christoph Schmal (Berlin/Germany) |
| P17 | A collection of mathemtaical models showing diauxic growth behaviour. Andreas Kremling (Garching/Germany) |
| P18 | Enzyme kinetics within our GRASP: A sampling framework for unravelling the feasible dynamic behaviour of metabolic reaction networks. Pedro Saa (Brisbane/Australia) |
| P19 | Modelling the glucocorticoid receptor dimerisation cycle. Johann Rohwer (Stellenbosch/South Africa) |
| P20 | Modelling the stress response of the mTOR network. Patricia Navas (Oldenburg/Germany) |
| P21 | Phase shifts and adaptations in glycolytic oscillations. David van Niekerk (Stellenbosch/South Africa) |
| P22 | Mathematical analysis of cellular noise during bimodal competence development in Streptococcus mutans. Sayuri Hahl (Garching/Germany) |
| P23 | Operating regimes and trade-offs in the CAND1-mediated regulation of SCF ligase activity. Ronny Straube (Erlangen/Germany) |
| P24 | Facilitation in rat pyramidal neurons can be explained by a single mechanism. Rikard Johansson (Linköping/Sweden) |
| P25 | Ultra-sensitivity in Signal Transducing Ring Assemblies. Shahid Khan (Berkeley/United States) |
| P26 | Auto-correlation of high-precision NFkB oscillation data for dynamic mean population models of TNFa signaling. Daniel Kaschek (Freiburg/Germany) |
| P27 | A phosphoproteome-wide mechanistic model of insulin signaling. William Lövfors (Linköping/Sweden) |
| P29 | Synaptic and near-synaptic glycine transport. What is the reason to be different? Kiril S. Zaytsev (Moscow/Russian Federation) |
| P30 | Studying the effects of fructose on hepatocyte metabolism through HepatoDyn. Carles Foguet (Barcelona/Spain) |
Session 3 – Plant physiology and development
| P31 | Metabolic balance mediates seed germination: a population wide integrative analysis of the effect of the environment and genetics on the link between seed metabolism and germination. Aaron Fait (Sede Boqer/Israel) |
| P32 | Modeling phosphorus uptake of Chlorella vulgaris. Ines Hotopp (Düsseldorf/Germany) |
| P33 | Modelling metabolism of the diatom Phaeodactylum tricornutum. Dipali Singh (Oxford/Great Britain) |
| P34 | Dynamical modelling of the heat shock response in Chlamydomonas reinhartii. Stefano Magni (Düsseldorf/Germany) |
| P35 | Generation and experimental validation of the plant immune signalling network. Ziva Ramsak (Ljubljana/Slovenia) |
| P36 | The many routes to blooming as outcomes of a divergent selection experiment for flowering time in maize. Christine Dillmann (Gif sur Yvette/France) |
| P37 | Characterizing maize leaf mechanics through automated fitting of tissue swelling data. Dirk De Vos (Antwerpen/Belgium) |
| P38 | Modelling of the fast brassinosteroid-regulated response pathway in the plasma membrane of Arabidopsis thaliana including cell wall expansion. Ruth Großeholz (Heidelberg/Germany) |
| P39 | Genome scale metabolic models of A. thaliana and C. reinhardtii helps to investigate energy dissipation mechanism under supra optimal light conditions. Kailash Adhikari (Oxord/Great Britain) |
| P40 | Modelling carotene desaturation via phytoene desaturase (PDS). Mirjam Fehling-Kaschek (Freiburg/Germany) |
| P41 | The Evolutionary Footprint in the Genes of Arabidopsis thaliana. Ovidiu Popa (Düsseldorf/Germany) |
| P42 | Dynamical models of glucosinolate metabolism in plants. Suraj Sharma (Düsseldorf/Germany) |
| P43 | GemTox – Prediction of mixture toxicity using genome scale metabolic models. Alexander Betz (Dübendorf/Switzerland) |
Session 4 – Biological thermodynamics
| P44 | FoF1-ATPsynthase proton transport modeling by quantum-mechanical approach. Elena Mashkovtseva (Moscow/Russian Federation) |
| P45 | Design Starch: Stochastic modelling of starch granule biogenesis. Adelaide Raguin (Düsseldorf/Germany) |
| P46 | Stochastic simulation modeling of proton transport through D‐channel in cytochrome c oxydase. Stanislav Boronovskii (Moscow/Russian Federation) |
| P47 | Reduction of patient temperature by iced water-gastric cooling – a systems biological approach. Milan Brumen (Maribor/Slovenia) |
Session 5 – Optimality principles
| P48 | A quantitative structural measure for concentration plasticity in metabolism. Jeanne Marie Onana Eloundou-Mbebi (Potsdam-Golm/Germany) |
| P49 | Towards robust, high-performance production strains: Constrained-based identification of strain designs leading to an optimally growth-coupled product synthesis. Tobias Benedikt Alter (Aachen/Germany) |
| P50 | Cells Balance Enzyme and Metabolite Concentrations to Optimally Utilize their Compartments. Martin Lercher (Düsseldorf/Germany) |
| P51 | A Minimal Model of Phototrophic Growth to Understand Resource Allocation in Cyanobacteria. Marjan Faizi (Berlin/Germany) |
| P52 | Inferring model errors and unmeasured system states with incomplete models: The dynamic elastic net. Maik Kschischo (Remagen/Germany) |
| P53 | Why Respirofermentation? Explaining the Warburg effect in tumour (and other) cells by a minimal model. Philip Möller (Jena/Germany) |
| P54 | How introduce metabolite concentrations in constraint-based modelling: an example with the tomato fruit? Christine Nazaret (Bordeaux/France) |
| P55 | Spatial distribution analysis of tree topology in arterial system model. Veronika Kopylova (Moscow/Russian Federation) |
| P56 | Model-based Optimal Control Design for Algal Bioprocesses: A Theoretical Study. Matthias Reinecke (Jena/Germany) |
| P57 | Model-based Optimal Control Design for Algal Bioprocesses: An Experimental Study. Tobias Weise (Jena/Germany) |
Session 6 – Multiscale systems medicine
| P58 | Zonation of hepatic fat accumulation under a high-fat diet: Modeling nutrient gradients and fatty acid uptake. Jana Schleicher (Jena/Germany) |
| P59 | Large Systems Biological Models – Challenges and Solutions. Clemens Kreutz (Freiburg/Germany) |
| P60 | Modeling liver volume regeneration with linear elasticity. Daniel Ioan Cazacu (Bremen/Germany) |
| P61 | From genome-scale model predictions, via diverse “omics” data to detailed pathway analysis in Refsum’s disease. Agnieszka Wegrzyn (Groningen/Netherlands) |
| P62 | Metabolic reprogramming in tumors by copy number co-alterations of proximal enzyme-coding and cancer-causing genes. Rainer König (Jena/Germany) |
| P63 | Why one should prefer to use fractional calculus tools in bioengineering rather than conventional calculus’? Özlem Öztürk Mızrak (Ankara/Turkey) |
| P64 | A mathematical model of gallbladder motility. Krystian Kubica (Wroclaw/Poland) |
| P65 | Estimating clinical outcomes from a mechanistic model of acute leukemias using decision rules. Dennis Görlich (Münster/Germany) |
| P66 | Multiscale drug simulations – from intracellular signalling pathways to physiological models. Elin Nyman (Linköping/Sweden) |
| P67 | Automatic method to combine three model layers of the cell. Cécile Moulin (Gif-sur-Yvette/France) |
| P68 | The geometry of a blood vessels bifurcation can affect the level of trophic damages under forming of a brain ischemic lesion. Yaroslav Nartsissov (Moscow/Russian Federation) |
| P69 | Model-driven Data Analysis Identification of the Metabolic Reprogramming associated with Prostate Epithelial Cancer Stem Cells Independent of the EMT Program. Marta Cascante (Barcelona/Spain) |
Session 7 – Metabolic Pathway Analysis
| P70 | The amount of organic phosphates (like DPG) existing in blood is determining factor of mammal’s bulk. Ramin Amirmardfar (Tabriz/Islamic Republic Of Iran) |
| P71 | Wanted: The Best Models For Pathway Modeling. Eberhard Voit (Atlanta/United States) |
| P72 | sAnalyzer: solution space analyser for metabolic pathway design. Jurijs Meitalovs (Jelgava/Latvia) |
| P73 | Carbon Labeling Experiments: Economic Design à la Carte. Katharina Nöh (Jülich/Germany) |
| P74 | Fast Minimal Network Finder. Annika Röhl (Berlin/Germany) |
| P75 | Human Scale Metabolic Model(s). Jean-Pierre Mazat (Bordeaux/France) |
| P76 | Identification of Target Knock Outs in Cupriavidus necator using Elementary Modes Analysis. Nicole Pearcy (Nottingham/Great Britain) |
| P77 | Compartmentalisation and Visualisation of Metabolic Networks. Thomas Pfau (Belvaux/Luxembourg) |
| P78 | Predicting compositions of microbial communities from stoichiometric models with applications for the biogas process. Sabine Koch (Magdeburg/Germany) |
| P79 | Probability-based Enhancement Promotes the Automated Metabolic Modeling of Diverse Microbial Metabolisms. Helena Mendes-Soares (Rochester/United States) |
| P80 | Metabolic pathway analysis in ageing mice. Sarah Stolle (Groningen/Netherlands) |
| P81 | Modelling Central Carbon Metabolism of Acetobacterium Woodii DSM1030 Using A Genome-Scale Metabolic Model. Noah Mesfin (Oxford/Great Britain) |
| P82 | Phylogenetic and modelling-based analyses of NAD metabolism: How differential precursor conversion drives signalling. Mathias Bockwoldt (Tromsø/Norway) |
| P83 | Expediting construction of integrative kinetic models of metabolism with GRaPe. Chuan Fu Yap (Manchester/Great Britain) |
| P84 | Construction and validation of a detailed kinetic model for muscle cell glycolysis. Jacobus van Dyk (Stellenbosch/South Africa) |
| P85 | A dynamic metabolic flux analysis of Myeloid-derived suppressor cells involved in the immunosuppression phenomenon. Mario Jolicoeur (Montréal/Canada) |
| P86 | Modelling genotype – phenotype relationship: from proteomic data to life-history traits in yeast. Marianyela Sabina Petrizzelli (Gif-sur-Yvette/France) |
| P87 | Dynamic Simulation of Stored Red Blood Cells Central Carbon Metabolism. Michel Prudent (Epalinges/Switzerland) |
| P88 | Exact quantification of cellular robustness in genome-scale metabolic networks. Jürgen Zanghellini (Vienna/Austria) |
| P89 | Dynamic characterization of the carbon overflow metabolism in Yarrowia lipolytica. Jorgelindo da Veiga Moreira (Palaiseau/France) |
| P90 | And then there were none: In silico predicted resensitisation of antibiotic resistance populations with metabolite supplementation strategies. Anu Raghunathan (Pune/India) |
| P91 | Integration of RNAseq data in iFA762 model provides insight into the ectoines metabolism of the halophilic bacteria Chromohalobacter salexigens. Francine Amaral (Sevilla/Spain) |
| P92 | Systems Biology of the modified branched Entner-Doudoroff pathway in Sulfolobus solfataricus. Ana Sofia Figueiredo (Magdeburg/Germany) |
| P93 | Workflows for fluxomics in the framework of PhenoMeNal project. Pedro de Atauri (Barcelona/Spain) |